SINGLE-PARTICLE TRACKING DATASET
COMING SOON
Investigating the dynamics of various transcription factors and chromatin regulators.
MICRO-C DATASET
Data is available at Higlass 3D genome browser and 4DN data portal.
COHESIN RESIDENCY DETERMINES CHROMATIN LOOP PATTERNS
Budding yeast
A364 WT
mcd1-AID
brn1-AID
wpl1-AID
pds5-AID
Time courses released from G1-arrest
RESOLVING THE 3D LANDSCAPE OF TRANSCRIPTION-LINKED MAMMALIAN CHROMATIN FOLDING
Mouse embryonic stem cells
ULTRASTRUCTURAL DETAILS OF MAMMALIAN CHROMOSOME ARCHITECTURE
3D ATAC-PALM: SUPER-RESOLUTION IMAGING OF THE ACCESSIBLE GENOME
Mouse embryonic stem cells
WT
CTCF-AID
DISTINCT CLASSES OF CHROMATIN LOOPS REVEALED BY DELETION OF AN RNA-BINDING REGION IN CTCF
Mouse embryonic stem cells
WT
CTCF-RBRi deletion
TRANSFER RNA GENES AFFECT CHROMOSOME STRUCTURE AND FUNCTION VIA LOCAL EFFECTS
Budding yeast
tDNA2334 strain
tDNA690 strain
MICRO-C XL: ASSAYING CHROMOSOME CONFORMATION FROM THE NUCLEOSOME TO THE ENTIRE GENOME
Budding yeast with various crosslinking conditions in the insoluble and soluble fractions
1% FA + DSG/EGS
3% FA + DSG/EGS
Fission yeast with various crosslinking conditions in the insoluble and soluble fractions
3% FA + DSG/EGS
MAPPING NUCLEOSOME RESOLUTION CHROMOSOME FOLDING IN YEAST BY MICRO-C
Budding yeast
Various treatments including diamide and thiolutin, and mutations including med1d, rnh201d, rpd3d, rtt109d, top1d, ssu72-2, rgr1-100, rsc8-21, scc2-4, sth1-2 H4d4-14, H4K16Q, H4Q93E, H4R23A,
Get in touch to learn more about our published research.
HISTONE MODIFICATION DATASET
HIGH-RESOLUTION CHROMATIN DYNAMICS DURING A YEAST STRESS RESPONSE
Comprehensive ChIP-seq data for histone modifications in budding yeast.
